教师信息

教师姓名:谭志杰
单 位
职 称 教授
学 历
E-mail zjtan@whu.edu.cn
研究方向

详细描述

姓   名: 谭志杰 (Zhi-Jie Tan)
职务/职称:教 授(博士生导师)
电子邮箱:zjtan@whu.edu.cn
研究方向:软物质物理、统计物理、生物物理
招生专业:凝聚态物理、理论物理、生物物理
Positions available:
本课题组长期招收软凝聚态物理、统计物理和生物物理方向的博士后和研究生。
Education & Experience:
1996年获武汉大学理学学士,2001年获武汉大学博士学位,期间获中国科学院奖学金,博士学位论文获全国优秀博士论文提名奖和湖北省优秀博士论文。博士生期间留武汉大学任教,2001年破格晋升为副教授,后公派赴美国密苏里大学合作研究,并获得该校生命科学博士后奖学金。2008年6月回到武汉大学,晋升为教授,并被遴选为博士生导师。2008年入选教育部新世纪人才计划,2010年获国家自然科学二等奖(第三完成人),2011年获湖北省青年科技奖。主讲研究生通开课《凝聚态物理》和弘毅物理班《热力学与统计物理》。现为美国生物物理学会会员。目前主持国家自然科学基金2项。
Research Interests:
1,发展物理模型,预测RNA的三维结构及其热力学;
2,发展统计力学理论,预测DNA、RNA结构折叠中的离子静电效应;
3,利用计算机模拟方法,理解和预测DNA、RNA折叠的结构、过程与机制;
4,发展模型和利用计算机模拟,理解和预测离子溶液中聚电解质的结构性质;
5,软物质复杂系统的自组织和动力学。
Review Articles:
1. Bao L, Zhang X, Jin L, & Tan ZJ. Flexibility of nucleic acids: from DNA to RNA. Chin Phys B 25: 018703(1-11), 2016.
2. Tan ZJ, Zhang WB, Shi YZ, & Wang FH. RNA folding: structure prediction, folding kinetics and ion electrostatics. Advances in Experimental Medicine & Biology 827:143-183, 2015.
3. Shi YZ, Wu YY, Wang FH, & Tan ZJ. RNA structure prediction: Progress and perspective. Chin Phys B 23: 078701(1-10), 2014.
4. Tan ZJ & Chen SJ. Importance of Diffuse Metal Ion Binding to RNA, 9:101-124. in "Structural and Catalytic Roles of Metal Ions in RNA" (volume of Metal Ions in Life Sciences), edited by Astrid Sigel, Helmut Sigel, and Roland K. O. Sigel. 2011. 
5. Tan ZJ & Chen SJ. Predicting electrostatic forces in RNA folding, 469:465-487, in "Biophysical Approaches to RNA Structure and Folding" (volume of Methods in Enzymology), edited by Daniel Herschlag. 2009.
Selected Papers:
1. Zhang ZL, Wu YY, Xi K, Sang JP, Tan ZJ. Divalent ion-mediated DNA-DNA interactions: A comparative study of triplex and duplex. Biophysical Journal 2017 113:517-528, 2017. (Highlighted article);
2. Zhang X, Bao L, Wu YY, Zhu XL, Tan ZJ. Radial distribution function of semiflexible oligomers with stretching flexibility. Journal of Chemical Physics 147:054901, 2017. (Featured article and recommended as AIP news);
3. Bao L, Zhang X, Shi YZ, Wu YY, Tan ZJ. Understanding the relative flexibility of RNA and DNA duplexes: stretching and twist-stretch coupling. Biophysical Journal 112:1094-1104, 2017;
4. Zhang X, Zhang JS, Shi YZ, Zhu XL & Tan ZJ. Potential of mean force between like-charged nanoparticles: many-body effect. Scientific Reports 6:23434(1-12), 2016;
5. Shi YZ, Jin L, Wang FH, Zhu XL & Tan ZJ. Predicting 3D structure, flexibility and stability of RNA hairpins in monovalent and divalent ion solutions. Biophysical Journal 109: 2654-2665, 2015.
6. Wu YY, Zhang ZL, Zhang JS, Zhu XL and Tan ZJ. Multivalent ion-mediated nucleic acid helix-helix interactions: RNA versus DNA. Nucleic Acids Research 43: 6156-6165, 2015.
7. Wu YY, Bao L, Zhang X & Tan ZJ. Flexibility of short DNAs with finite-length effect: from base pairs to tens of base pairs. Journal of Chemical Physics 142: 125103(1-13), 2015;
8. Shi YZ, Wang FH, Wu YY, & Tan ZJ. A coarse-grained model with implicit salt for RNAs: Predicting 3D structure, stability and salt effect. Journal of Chemical Physics 141:105102(1-13), 2014.
9. Wang FH, Wu YY, & Tan ZJ, Salt contribution to the flexibility of single-stranded nucleic acid of finite length. Biopolymers 99:370–381, 2013. (Cover);
10. Tan ZJ & Chen SJ. Ion-mediated RNA structural collapse: effect of spatial confinement. Biophysical Journal 103:827-836, 2012;
11. Tan ZJ & Chen SJ. Salt contribution to RNA tertiary structure folding stability. Biophysical Journal 101:176-187, 2011;
12. Tan ZJ & Chen SJ. Predicting ion binding properties for RNA tertiary structures. Biophysical Journal 99:1565-1576 2010 ;
13. G. Chen, Z.J. Tan, S.J. Chen, Salt dependent folding energy landscape of RNA three-way junction. Biophysical Journal 98:111-120, 2010.
14. Tan ZJ & Chen SJ. Salt dependence of nucleic acid hairpin stability. Biophysical Journal 95:738-752, 2008;
15. Tan ZJ & Chen SJ. Electrostatic free energy landscapes for DNA helix bending. Biophysical Journal 94:3137-3149, 2008;
16. Tan ZJ & Chen SJ. RNA helix stability in mixed Na+/Mg2+ solutions. Biophysical Journal 92:3615-3632, 2007;
17. Tan ZJ & Chen SJ. Electrostatic free energy landscapes for nucleic acid helix assembly. Nucleic Acids Research 34:6629-6639, 2006;
18. Tan ZJ & Chen SJ. Ion-mediated nucleic acid helix-helix interactions. Biophysical Journal 91:518-536, 2006;
19. Tan ZJ & Chen SJ. Nucleic acid helix stability: effects of salt concentration, cation valency and size, and chain length. Biophysical Journal 90:1175-1190, 2006;
20. Tan ZJ & Chen SJ. Electrostatic correlation and fluctuations for ion binding to finite length polyelectrolyte. Journal of Chemical Physics 122:044903(1-16), 2005;
21. Tan ZJ, Zou XW, Huang SY & Jin ZZ. Pattern of particle distribution in multi-particle system by random walk with memory enhancement and decay. Physical Review E 66:011101, 2002;
22. Tan ZJ, Zou XW, Huang SY & Jin ZZ. Deposition, diffusion and aggregation on percolations: A model for nanostructure growth on nonuniform substrates. Physical Review B 65:235403, 2002;
23. Tan ZJ, Zou XW, Zhang W, & Jin ZZ. Pattern formation on nonuniform surfaces by correlated-random sequential adsorption. Physical Review E 65:057201, 2002;
24. Tan ZJ, Zou XW, Huang SY, Zhang W, & Jin ZZ. Random walk with memorial enhancement and decay. Physical Review E 65:041101, 2002;
25. Tan ZJ, Zou XW & Jin ZZ. Percolation with long-range correlations for epidemic spreading. Physical Review E 62:8409-8412, 2000;
26. Tan ZJ, Zou XW, Zhang WB & Jin ZZ. Structure transition in cluster-cluster aggregation under external fields. Physical Review E 61:734-737, 2000;
27. Tan ZJ, Zou XW, Zhang WB & Jin ZZ. Influence of particle size on diffusion-limited aggregation. Physical Review E 60:6202-6205, 1999;
28. Tan ZJ, Zou XW, Zhang WB & Jin ZZ. Influences of the size and dielectric properties of particles on electrorheological response. Physical Review E 59:3177-3181, 1999.

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